SeqPup SeqPup is a biological sequence editor and analysis program. It includes links to network services and external analysis programs. Features include: multiple sequence alignment and single sequence editors read and write several sequence file formats easy hand alignment features including colored bases and sliding Internet sequence analysis services by BOP and email methods automatic multiple sequence alignment with ClustalW app automatic gel fragment alignment to contigs with CAP app automatic base calling from ABI or SCF trace files with autoseq app phylogenetic analysis of alignments with fastDNAml and LSADT apps consensus, reverse, complement, degap, and distance/similarity operations restriction maps pretty print of alignments and sequences with boxed and shaded regions. translate dna to/from protein using various codon tables find strings and ORFs automatic preference saving user-definable links to external analysis programs

Current Version:   0.6 License Type:   Free

Home Site: http://iubio.bio.indiana.edu/IUBio-Software+Data/molbio/seqpup/ Source Code Availability:   Yes Available Binary Packages: Debian Package:   No RedHat RPM Package:   No Other Packages:   Yes (see Home Page) Targeted Platforms: Macintosh (PowerMac and 68K), MS Windows (Win95, WinNT and Win3), and Unix/XWindows systems including Sun Solaris, SGI Irix, DEC Unix, Linux. Software/Hardware Requirements: None

Other Links: None Mailing Lists/USENET News Groups: None User Comments: None See A Screen Shot? (Not Yet)

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